Tuesday, December 08, 2020

i386 ports build report; failures in rebar3, armadillo, py-h5py

rebar3 never built (bad_term_file,"/root/.config/rebar3/rebar.config"),
hdf5 broke the others, could they either be fixed / marked BROKEN or the
relevant commits backed out please?

----- Forwarded message -----

started at 1607273419 Sun Dec 6 09:50:19 MST 2020
finished at 1607424837 Tue Dec 8 03:53:57 MST 2020
report generated at 1607424862 Tue Dec 8 03:54:22 MST 2020
total 42h3m
done with kern.version=OpenBSD 6.8-current (GENERIC.MP) #0: Sun Dec 6 09:30:48 MST 2020

built packages10583
3902
2342
4338

build failures: 3
devel/rebar3
math/armadillo
math/py-h5py,python3

new failures
resolved failures

packages newly built
packages not built this time
=====================================
==> failures/devel/rebar3.log <==
The text leading up to this was:
--------------------------
|$OpenBSD: patch-src_rebar_prv_escriptize_erl,v 1.1.1.1 2020/11/26 03:31:56 jmatthew Exp $
|
|Use versioned escript
|
|Index: src/rebar_prv_escriptize.erl
|--- src/rebar_prv_escriptize.erl.orig
|+++ src/rebar_prv_escriptize.erl
--------------------------
Patching file src/rebar_prv_escriptize.erl using Plan A...
Hunk #1 succeeded at 126.
done
===> Compiler link: clang -> /usr/bin/clang
===> Compiler link: clang++ -> /usr/bin/clang++
===> Compiler link: cc -> /usr/bin/cc
===> Compiler link: c++ -> /usr/bin/c++
>>> Running configure in devel/rebar3 at 1607400198.95
===> devel/rebar3
===> Generating configure for rebar3-3.13.2-erlang21
===> Configuring for rebar3-3.13.2-erlang21
/usr/bin/perl /usr/ports/infrastructure/bin/pkg_subst -DERL_VERSION=21 -DARCH=i386 -DBASE_PKGPATH=devel/rebar3,erlang21 -DFLAVOR_EXT=-erlang21 -DFULLPKGNAME=rebar3-3.13.2-erlang21 -DHOMEPAGE=https://www.rebar3.org -DLOCALBASE=/usr/local -DLOCALSTATEDIR=/var -DMACHINE_ARCH=i386 -DMAINTAINER=Jonathan\ Matthew\ \<jmatthew@openbsd.org\> -DPREFIX=/usr/local -DRCDIR=/etc/rc.d -DSYSCONFDIR=/etc -DTRUEPREFIX=/usr/local -DX11BASE=/usr/X11R6 -DPKGSTEM=rebar3 -i -B /pobj/rebar3-3.13.2-erlang21 /pobj/rebar3-3.13.2-erlang21/rebar3-3.13.2/bootstrap /pobj/rebar3-3.13.2-erlang21/rebar3-3.13.2/src/rebar_prv_escriptize.erl /pobj/rebar3-3.13.2-erlang21/rebar3-3.13.2/_build/default/lib/relx/priv/templates/bin /pobj/rebar3-3.13.2-erlang21/rebar3-3.13.2/_build/default/lib/relx/priv/templates/extended_bin
>>> Running build in devel/rebar3 at 1607400199.13
===> devel/rebar3
===> Building for rebar3-3.13.2-erlang21
cd /pobj/rebar3-3.13.2-erlang21/rebar3-3.13.2 && /pobj/rebar3-3.13.2-erlang21/rebar3-3.13.2/bootstrap
Dependency providers already exists
Dependency getopt already exists
Dependency cf already exists
Dependency erlware_commons already exists
Dependency parse_trans already exists
Dependency certifi already exists
escript: exception throw: {error,
{rebar_file_utils,
{bad_term_file,"/root/.config/rebar3/rebar.config",
eacces}}}
in function rebar_file_utils:try_consult/1 (src/rebar_file_utils.erl, line 67)
in call from rebar_config:consult_file/1 (src/rebar_config.erl, line 212)
in call from rebar_utils:get_http_vars/1 (src/rebar_utils.erl, line 910)
in call from rebar_utils:set_httpc_options/0 (src/rebar_utils.erl, line 920)
in call from rebar3:init_config/0 (src/rebar3.erl, line 201)
in call from rebar3:run/1 (src/rebar3.erl, line 100)
*** Error 127 in devel/rebar3 (Makefile:74 'do-build')
*** Error 2 in devel/rebar3 (/usr/ports/infrastructure/mk/bsd.port.mk:2925 '/pobj/rebar3-3.13.2-erlang21/.build_done': @cd /usr/ports/devel/...)
*** Error 2 in devel/rebar3 (/usr/ports/infrastructure/mk/bsd.port.mk:2588 'build': @lock=rebar3-3.13.2-erlang21; export _LOCKS_HELD=" reba...)
===> Exiting devel/rebar3 with an error
*** Error 1 in /usr/ports (infrastructure/mk/bsd.port.subdir.mk:137 'build': @: ${echo_msg:=echo}; : ${target:=build}; for i in ; do eval...)
>>> Ended at 1607400205.15
max_stuck=4.43/depends=7.36/show-prepare-results=0.22/patch=0.64/configure=0.18/build=6.04
Error: job failed with 512 on localhost at 1607400205

==> failures/math/armadillo.log <==
-- Could not find SuperLU
-- SuperLU_FOUND = NO
--
-- *** Armadillo wrapper library will use the following libraries:
-- *** ARMA_LIBS = /usr/local/lib/libblas.so.2.1;gfortran;/usr/local/lib/liblapack.so.7.1;gfortran;/usr/local/lib/libhdf5.so.3.0;/usr/lib/libz.so.5.0;/usr/lib/libm.so.10.1;/usr/local/lib/libarpack.so.1.0
--
-- Copying /pobj/armadillo-9.800.1/armadillo-9.800.1/include/ to /pobj/armadillo-9.800.1/build-i386/tmp/include/
-- Generating /pobj/armadillo-9.800.1/build-i386/tmp/include/config.hpp
-- Generating /pobj/armadillo-9.800.1/armadillo-9.800.1/examples/Makefile
-- CMAKE_CXX_FLAGS = -O2 -pipe
-- CMAKE_SHARED_LINKER_FLAGS =
-- CMAKE_REQUIRED_INCLUDES = /usr/local/include
--
-- CMAKE_INSTALL_PREFIX = /usr/local
-- CMAKE_INSTALL_LIBDIR = lib
-- CMAKE_INSTALL_INCLUDEDIR = include
-- CMAKE_INSTALL_DATADIR = share
-- CMAKE_INSTALL_BINDIR = bin
-- Generating '/pobj/armadillo-9.800.1/build-i386/ArmadilloConfig.cmake'
-- Generating '/pobj/armadillo-9.800.1/build-i386/ArmadilloConfigVersion.cmake'
-- Generating '/pobj/armadillo-9.800.1/build-i386/InstallFiles/ArmadilloConfig.cmake'
-- Generating '/pobj/armadillo-9.800.1/build-i386/InstallFiles/ArmadilloConfigVersion.cmake'
-- Copying /pobj/armadillo-9.800.1/armadillo-9.800.1/misc/ to /pobj/armadillo-9.800.1/build-i386/tmp/misc/
-- Generating '/pobj/armadillo-9.800.1/build-i386/tmp/misc/armadillo.pc'
-- Configuring done
-- Generating done
-- Build files have been written to: /pobj/armadillo-9.800.1/build-i386
===> Building for armadillo-9.800.1
[1/4] /pobj/armadillo-9.800.1/bin/c++ -Darmadillo_EXPORTS -Itmp/include -I/usr/local/include -O2 -pipe -DNDEBUG -fPIC -MD -MT CMakeFiles/armadillo.dir/src/wrapper1.cpp.o -MF CMakeFiles/armadillo.dir/src/wrapper1.cpp.o.d -o CMakeFiles/armadillo.dir/src/wrapper1.cpp.o -c /pobj/armadillo-9.800.1/armadillo-9.800.1/src/wrapper1.cpp
FAILED: CMakeFiles/armadillo.dir/src/wrapper1.cpp.o
/pobj/armadillo-9.800.1/bin/c++ -Darmadillo_EXPORTS -Itmp/include -I/usr/local/include -O2 -pipe -DNDEBUG -fPIC -MD -MT CMakeFiles/armadillo.dir/src/wrapper1.cpp.o -MF CMakeFiles/armadillo.dir/src/wrapper1.cpp.o.d -o CMakeFiles/armadillo.dir/src/wrapper1.cpp.o -c /pobj/armadillo-9.800.1/armadillo-9.800.1/src/wrapper1.cpp
/pobj/armadillo-9.800.1/armadillo-9.800.1/src/wrapper1.cpp:1697:14: error: no matching function for call to 'H5Ovisit3'
return H5Ovisit(object_id, index_type, order, op, op_data);
^~~~~~~~
/usr/local/include/H5version.h:785:20: note: expanded from macro 'H5Ovisit'
#define H5Ovisit H5Ovisit3
^~~~~~~~~
/usr/local/include/H5Opublic.h:211:15: note: candidate function not viable: requires 6 arguments, but 5 were provided
H5_DLL herr_t H5Ovisit3(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order,
^
1 error generated.
ninja: build stopped: subcommand failed.
*** Error 1 in math/armadillo (/usr/ports/devel/cmake/cmake.port.mk:36 'do-build': @cd /pobj/armadillo-9.800.1/build-i386 && exec /usr/bin/e...)
===> Exiting math/armadillo with an error
*** Error 2 in math/armadillo (/usr/ports/infrastructure/mk/bsd.port.mk:2925 '/pobj/armadillo-9.800.1/build-i386/.build_done': @cd /usr/port...)
*** Error 2 in math/armadillo (/usr/ports/infrastructure/mk/bsd.port.mk:2588 'build': @lock=armadillo-9.800.1; export _LOCKS_HELD=" armadil...)
*** Error 1 in /usr/ports (infrastructure/mk/bsd.port.subdir.mk:137 'build': @: ${echo_msg:=echo}; : ${target:=build}; for i in ; do eval...)
>>> Ended at 1607281720.19
max_stuck=0.00/depends=1.51/show-prepare-results=0.58/build=2.46
Error: job failed with 512 on i386-3 at 1607281720

==> failures/math/py-h5py,python3.log <==
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
error: command 'cc' failed with exit status 1
*** Error 1 in math/py-h5py (/usr/ports/lang/python/python.port.mk:251 'do-build': @: ;cd /pobj/py-h5py-2.10.0-python3/h5py-2.10.0 && /usr/b...)
*** Error 2 in math/py-h5py (/usr/ports/infrastructure/mk/bsd.port.mk:2925 '/pobj/py-h5py-2.10.0-python3/.build_done': @cd /usr/ports/math/p...)
*** Error 2 in math/py-h5py (/usr/ports/infrastructure/mk/bsd.port.mk:2588 'build': @lock=py3-h5py-2.10.0p1; export _LOCKS_HELD=" py3-h5py-...)
===> Exiting math/py-h5py,python3 with an error
*** Error 1 in /usr/ports (infrastructure/mk/bsd.port.subdir.mk:137 'build': @: ${echo_msg:=echo}; : ${target:=build}; for i in ; do eval...)
>>> Ended at 1607421158.78
max_stuck=5.52/depends=5.78/show-prepare-results=0.82/build=20.87
Error: job failed with 512 on i386-3 at 1607421158

----- End forwarded message -----

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